Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.46□□□□□ -0.57
ACANP16112 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ACANP16112 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.46□□□□□ -0.57
ACANP16112 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ACANP16112 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC11.46□□□□□ -0.57
ACANP16112 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.46□□□□□ -0.57
ACANP16112 AL161727.1-201ENST00000457409 530 ntBASIC11.46□□□□□ -0.57
ACANP16112 AC007679.1-201ENST00000458609 502 ntBASIC11.46□□□□□ -0.57
ACANP16112 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.46□□□□□ -0.57
ACANP16112 AC023051.2-201ENST00000541141 460 ntBASIC11.46□□□□□ -0.57
ACANP16112 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 AC134878.2-201ENST00000620700 1265 ntBASIC11.46□□□□□ -0.57
ACANP16112 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.46□□□□□ -0.57
ACANP16112 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.46□□□□□ -0.57
ACANP16112 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ACANP16112 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
ACANP16112 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.46□□□□□ -0.58
ACANP16112 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.46□□□□□ -0.58
ACANP16112 FAM86FP-201ENST00000338711 969 ntBASIC11.46□□□□□ -0.58
ACANP16112 RNA5SP491-201ENST00000362936 118 ntBASIC11.46□□□□□ -0.58
ACANP16112 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
ACANP16112 PPP1R2P10-201ENST00000393023 595 ntBASIC11.46□□□□□ -0.58
ACANP16112 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.46□□□□□ -0.58
ACANP16112 AC007881.1-201ENST00000437460 187 ntBASIC11.46□□□□□ -0.58
ACANP16112 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.46□□□□□ -0.58
ACANP16112 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.46□□□□□ -0.58
ACANP16112 RNA5SP288-201ENST00000516075 93 ntBASIC11.46□□□□□ -0.58
ACANP16112 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC11.46□□□□□ -0.58
ACANP16112 ABCD1P3-201ENST00000562927 605 ntBASIC11.46□□□□□ -0.58
ACANP16112 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC11.46□□□□□ -0.58
ACANP16112 KF455155.1-201ENST00000604493 303 ntBASIC11.46□□□□□ -0.58
ACANP16112 AL031590.1-202ENST00000641466 1737 ntBASIC11.46□□□□□ -0.58
ACANP16112 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
ACANP16112 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ACANP16112 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.45□□□□□ -0.58
ACANP16112 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC11.45□□□□□ -0.58
ACANP16112 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 MPV17-209ENST00000405983 859 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC11.45□□□□□ -0.58
ACANP16112 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC11.45□□□□□ -0.58
ACANP16112 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.45□□□□□ -0.58
ACANP16112 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ACANP16112 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.45□□□□□ -0.58
ACANP16112 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ACANP16112 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms