Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 LILRP1-201ENST00000444199 1370 ntBASIC14.34□□□□□ -0.11
RETP07949 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RETP07949 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.34□□□□□ -0.11
RETP07949 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RETP07949 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 AC063952.3-201ENST00000467756 308 ntBASIC14.34□□□□□ -0.11
RETP07949 AC083801.1-201ENST00000491689 358 ntBASIC14.34□□□□□ -0.11
RETP07949 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.34□□□□□ -0.11
RETP07949 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.34□□□□□ -0.11
RETP07949 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.34□□□□□ -0.11
RETP07949 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.34□□□□□ -0.11
RETP07949 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 AC010632.2-201ENST00000588369 1224 ntBASIC14.34□□□□□ -0.11
RETP07949 AC021016.3-201ENST00000608367 477 ntBASIC14.34□□□□□ -0.11
RETP07949 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.34□□□□□ -0.11
RETP07949 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.34□□□□□ -0.11
RETP07949 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RETP07949 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RETP07949 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RETP07949 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.34□□□□□ -0.11
RETP07949 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RETP07949 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.33□□□□□ -0.11
RETP07949 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RETP07949 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RETP07949 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RETP07949 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RETP07949 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RETP07949 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
RETP07949 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RETP07949 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RETP07949 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.33□□□□□ -0.12
RETP07949 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 MIR566-201ENST00000385187 94 ntBASIC14.33□□□□□ -0.12
RETP07949 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.33□□□□□ -0.12
RETP07949 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.33□□□□□ -0.12
RETP07949 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RETP07949 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.33□□□□□ -0.12
RETP07949 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RETP07949 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.33□□□□□ -0.12
RETP07949 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.33□□□□□ -0.12
RETP07949 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.33□□□□□ -0.12
RETP07949 SIGLEC22P-201ENST00000599104 714 ntBASIC14.33□□□□□ -0.12
RETP07949 AC006483.2-201ENST00000609813 515 ntBASIC14.33□□□□□ -0.12
RETP07949 AL627230.2-201ENST00000613254 655 ntBASIC14.33□□□□□ -0.12
RETP07949 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.33□□□□□ -0.12
RETP07949 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
RETP07949 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RETP07949 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RETP07949 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.33□□□□□ -0.12
RETP07949 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.33□□□□□ -0.12
RETP07949 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.33□□□□□ -0.12
RETP07949 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms