Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.13■□□□□ 0.33
APPP05067 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.13■□□□□ 0.33
APPP05067 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.13■□□□□ 0.33
APPP05067 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.13■□□□□ 0.33
APPP05067 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
APPP05067 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APPP05067 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
APPP05067 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.13■□□□□ 0.33
APPP05067 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
APPP05067 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.13■□□□□ 0.33
APPP05067 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APPP05067 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.12■□□□□ 0.33
APPP05067 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
APPP05067 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.12■□□□□ 0.33
APPP05067 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APPP05067 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
APPP05067 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
APPP05067 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
APPP05067 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.12■□□□□ 0.33
APPP05067 RPS9P1-201ENST00000419943 583 ntBASIC17.12■□□□□ 0.33
APPP05067 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 AC008723.1-201ENST00000506922 207 ntBASIC17.12■□□□□ 0.33
APPP05067 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.12■□□□□ 0.33
APPP05067 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 RTN3P1-201ENST00000536295 711 ntBASIC17.12■□□□□ 0.33
APPP05067 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 AL109837.1-201ENST00000603272 613 ntBASIC17.12■□□□□ 0.33
APPP05067 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 MEG3_2.1-201ENST00000611456 105 ntBASIC17.12■□□□□ 0.33
APPP05067 LINC01783-202ENST00000614408 828 ntBASIC17.12■□□□□ 0.33
APPP05067 BX284668.2-205ENST00000619677 828 ntBASIC17.12■□□□□ 0.33
APPP05067 AC091812.3-201ENST00000621362 345 ntBASIC17.12■□□□□ 0.33
APPP05067 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.12■□□□□ 0.33
APPP05067 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
APPP05067 TUBB8P4-201ENST00000511806 1324 ntBASIC17.12■□□□□ 0.33
APPP05067 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APPP05067 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.12■□□□□ 0.33
APPP05067 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
APPP05067 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APPP05067 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
APPP05067 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APPP05067 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 USP17L6P-201ENST00000382470 1197 ntBASIC17.11■□□□□ 0.33
APPP05067 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.11■□□□□ 0.33
APPP05067 AL353637.1-201ENST00000451571 732 ntBASIC17.11■□□□□ 0.33
APPP05067 FGFR3P5-201ENST00000564496 886 ntBASIC17.11■□□□□ 0.33
APPP05067 AC093752.3-201ENST00000567343 901 ntBASIC17.11■□□□□ 0.33
APPP05067 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.11■□□□□ 0.33
APPP05067 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.11■□□□□ 0.33
APPP05067 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 BRD7P5-201ENST00000299197 1822 ntBASIC17.11■□□□□ 0.33
APPP05067 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.11■□□□□ 0.33
APPP05067 LINC00115-201ENST00000473798 1317 ntBASIC17.11■□□□□ 0.33
APPP05067 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
APPP05067 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
APPP05067 HSPA7-201ENST00000445535 1927 ntBASIC17.11■□□□□ 0.33
APPP05067 AC016397.2-201ENST00000624848 1985 ntBASIC17.11■□□□□ 0.33
APPP05067 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
APPP05067 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
APPP05067 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APPP05067 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
APPP05067 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms