Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.99□□□□□ -0.49
CD74P04233 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 ZNF493-208ENST00000599461 1769 ntBASIC11.98□□□□□ -0.49
CD74P04233 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 REXO1L6P-201ENST00000603433 1515 ntBASIC11.98□□□□□ -0.49
CD74P04233 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CD74P04233 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.98□□□□□ -0.49
CD74P04233 AC004967.1-201ENST00000453589 447 ntBASIC11.98□□□□□ -0.49
CD74P04233 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CD74P04233 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.98□□□□□ -0.49
CD74P04233 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 AC055876.2-201ENST00000531834 546 ntBASIC11.98□□□□□ -0.49
CD74P04233 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.98□□□□□ -0.49
CD74P04233 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 AC106820.3-201ENST00000561653 397 ntBASIC11.98□□□□□ -0.49
CD74P04233 SNHG9-202ENST00000564014 471 ntBASIC11.98□□□□□ -0.49
CD74P04233 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.98□□□□□ -0.49
CD74P04233 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 AC008825.2-201ENST00000603374 718 ntBASIC11.98□□□□□ -0.49
CD74P04233 AC133539.2-201ENST00000604757 467 ntBASIC11.98□□□□□ -0.49
CD74P04233 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 AC093726.1-201ENST00000608064 963 ntBASIC11.98□□□□□ -0.49
CD74P04233 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.98□□□□□ -0.49
CD74P04233 AC027601.3-201ENST00000622907 509 ntBASIC11.98□□□□□ -0.49
CD74P04233 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 AC079781.4-201ENST00000641908 219 ntBASIC11.98□□□□□ -0.49
CD74P04233 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CD74P04233 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 AC015819.3-201ENST00000624305 2674 ntBASIC11.98□□□□□ -0.49
CD74P04233 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 AC110048.1-201ENST00000604293 2157 ntBASIC11.98□□□□□ -0.49
CD74P04233 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.98□□□□□ -0.49
CD74P04233 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CD74P04233 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.98□□□□□ -0.49
CD74P04233 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CD74P04233 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms