Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 LAP3P2-201ENST00000454686 1454 ntBASIC10.74□□□□□ -0.69
LTAP01374 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 HMGA1P1-201ENST00000415560 1062 ntBASIC10.74□□□□□ -0.69
LTAP01374 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.74□□□□□ -0.69
LTAP01374 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.74□□□□□ -0.69
LTAP01374 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 AL512310.5-201ENST00000551999 515 ntBASIC10.74□□□□□ -0.69
LTAP01374 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
LTAP01374 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC10.74□□□□□ -0.69
LTAP01374 AC008825.2-201ENST00000603374 718 ntBASIC10.74□□□□□ -0.69
LTAP01374 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 AC027601.3-201ENST00000622907 509 ntBASIC10.74□□□□□ -0.69
LTAP01374 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
LTAP01374 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.74□□□□□ -0.69
LTAP01374 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LTAP01374 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
LTAP01374 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LTAP01374 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC10.73□□□□□ -0.69
LTAP01374 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LTAP01374 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.73□□□□□ -0.69
LTAP01374 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LTAP01374 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms