Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PDGFBP01127 KRT18P33-201ENST00000398525 1043 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 DNM1P46-202ENST00000415963 882 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 UGT1A12P-201ENST00000447084 853 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 AC023051.2-201ENST00000541141 460 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.06□□□□□ -0.16
PDGFBP01127 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 DERL2-206ENST00000572834 589 ntTSL 3 BASIC14.06□□□□□ -0.16
PDGFBP01127 AC112220.4-201ENST00000604982 1263 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 MEP1AP1-201ENST00000636082 1097 ntBASIC14.06□□□□□ -0.16
PDGFBP01127 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.05□□□□□ -0.16
PDGFBP01127 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDGFBP01127 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PDGFBP01127 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDGFBP01127 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.05□□□□□ -0.16
PDGFBP01127 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 TUBB2BP1-201ENST00000404155 871 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 TPT1P9-201ENST00000413759 514 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 AC026884.1-201ENST00000418296 457 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.05□□□□□ -0.16
PDGFBP01127 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.05□□□□□ -0.16
PDGFBP01127 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.05□□□□□ -0.16
PDGFBP01127 FAM187B2P-201ENST00000577135 713 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.05□□□□□ -0.16
PDGFBP01127 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.05□□□□□ -0.16
PDGFBP01127 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 AC064801.2-201ENST00000625052 1303 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PDGFBP01127 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 AC064850.1-201ENST00000413279 1398 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 AL365203.3-201ENST00000609742 2057 ntBASIC14.05□□□□□ -0.16
PDGFBP01127 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
PDGFBP01127 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDGFBP01127 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDGFBP01127 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PDGFBP01127 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PDGFBP01127 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms