Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
COLCA2A8K830 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
COLCA2A8K830 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
COLCA2A8K830 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 ARSEP1-201ENST00000420443 635 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.81□□□□□ -0.68
COLCA2A8K830 LAGE3P1-201ENST00000425356 484 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.81□□□□□ -0.68
COLCA2A8K830 ATP5G1P1-201ENST00000448724 379 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 KRT18P43-201ENST00000469825 1281 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC136632.2-201ENST00000512891 861 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.81□□□□□ -0.68
COLCA2A8K830 TPSP2-201ENST00000561760 610 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 AC034105.1-201ENST00000563488 319 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
COLCA2A8K830 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC004790.2-201ENST00000623588 572 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC009093.10-201ENST00000641956 1442 ntBASIC10.81□□□□□ -0.68
COLCA2A8K830 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC10.81□□□□□ -0.68
COLCA2A8K830 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
COLCA2A8K830 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC10.81□□□□□ -0.68
COLCA2A8K830 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.81□□□□□ -0.68
COLCA2A8K830 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
COLCA2A8K830 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.8□□□□□ -0.68
COLCA2A8K830 AC007336.3-201ENST00000623886 2160 ntBASIC10.8□□□□□ -0.68
COLCA2A8K830 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.8□□□□□ -0.68
COLCA2A8K830 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
COLCA2A8K830 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
COLCA2A8K830 AC016734.2-201ENST00000624325 1377 ntBASIC10.8□□□□□ -0.68
COLCA2A8K830 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
COLCA2A8K830 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
COLCA2A8K830 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC10.8□□□□□ -0.68
COLCA2A8K830 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
COLCA2A8K830 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms