Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AL365181.1-201ENST00000564032 1828 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 IL9RP3-201ENST00000442856 1674 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AL022313.4-201ENST00000562756 2046 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 HRC-203ENST00000595625 2044 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC104590.1-202ENST00000558368 1921 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AL132656.4-201ENST00000623504 2122 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 AC138028.6-201ENST00000616106 1482 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 TUBB4AP1-201ENST00000450755 1325 ntBASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LINC01558Q9Y6Z2 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms