Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC084781.1-201ENST00000613737 656 ntBASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC005618.3-201ENST00000624928 458 ntBASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.46■□□□□ 0.22
CTDP1Q9Y5B0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CTDP1Q9Y5B0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTDP1Q9Y5B0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CTDP1Q9Y5B0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 LINC00115-201ENST00000473798 1317 ntBASIC16.45■□□□□ 0.22
CTDP1Q9Y5B0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 GUSBP10-201ENST00000417412 665 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 RNA5SP417-201ENST00000516459 108 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 CR383656.3-201ENST00000551315 183 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 AC145285.5-201ENST00000562217 361 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 AC025271.4-201ENST00000621477 1726 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 LINC01815-202ENST00000641468 1409 ntBASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.44■□□□□ 0.22
CTDP1Q9Y5B0 RN7SL832P-201ENST00000607781 1756 ntBASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTDP1Q9Y5B0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms