Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ACTBP8-201ENST00000403258 1108 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 AC092580.3-201ENST00000430932 139 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CNN2P2-201ENST00000443536 909 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PUDPP3-201ENST00000445368 636 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CNN2P3-201ENST00000450201 906 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ALG3P1-201ENST00000508806 1114 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 AL136317.3-201ENST00000618497 906 ntBASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RCL1Q9Y2P8 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC100757.3-201ENST00000622361 1406 ntBASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 LINC01165-201ENST00000445190 1623 ntBASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 MIR574-201ENST00000385209 96 ntBASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC134915.1-201ENST00000426461 574 ntBASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC009477.1-201ENST00000452936 217 ntBASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.69□□□□□ -0.54
RCL1Q9Y2P8 Z92544.3-201ENST00000624747 417 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms