Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 RPL13AP3-202ENST00000494676 1473 ntBASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRIT1Q9P2V4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC090505.1-201ENST00000430515 1834 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC103592.1-201ENST00000394513 664 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PPP1R2P4-201ENST00000424051 595 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC114501.1-201ENST00000445949 172 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC068867.1-201ENST00000559855 150 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 RN7SL357P-201ENST00000581065 298 ntBASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT1Q9P2V4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 AL022313.4-201ENST00000562756 2046 ntBASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 AC067750.1-201ENST00000608826 6545 ntBASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 LINC00265-2P-201ENST00000413372 782 ntBASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 GRPEL2P1-201ENST00000453145 339 ntBASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 RN7SL767P-201ENST00000493013 295 ntBASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.71□□□□□ -0.21
LRIT1Q9P2V4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms