Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AC103592.1-201ENST00000394513 664 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AL355994.1-201ENST00000424379 260 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 ISCA2P1-201ENST00000425548 448 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 Z97180.1-201ENST00000445173 988 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AC012618.1-201ENST00000461223 412 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 FRMPD2B-201ENST00000431305 1347 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 HMGA1P1-201ENST00000415560 1062 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 DUX4L50-201ENST00000455245 715 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC105129.2-201ENST00000559536 390 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 MEG3_2.1-201ENST00000611456 105 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 BAP1-211ENST00000615113 489 ntBASIC15□□□□□ -0.01
SCUBE3Q8IX30 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15□□□□□ -0.01
SCUBE3Q8IX30 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SCUBE3Q8IX30 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCUBE3Q8IX30 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms