Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AC005089.1-201ENST00000619486 2241 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 HERC2P11-201ENST00000562845 725 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AC100756.2-201ENST00000569537 736 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AP005212.2-201ENST00000584979 510 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AL139339.2-201ENST00000608063 657 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 HMGB1P24-201ENST00000611897 328 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AC018629.1-201ENST00000623381 1736 ntBASIC15.16■□□□□ 0.02
RNF135Q8IUD6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF135Q8IUD6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 LINC01230-201ENST00000625222 3017 ntBASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 SERBP1P2-201ENST00000436888 1164 ntBASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PGAM1P12-201ENST00000505622 748 ntBASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AC138701.2-201ENST00000553634 226 ntBASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms