Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.77□□□□□ -0.36
LRRC28Q86X40 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LRRC28Q86X40 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 SNX29P1-201ENST00000548357 1007 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 AL603764.1-201ENST00000636452 321 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 MRPL37P1-201ENST00000592451 1337 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 LRRC59-203ENST00000576448 1531 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.77□□□□□ -0.37
LRRC28Q86X40 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 AL138709.1-201ENST00000614840 1693 ntBASIC12.77□□□□□ -0.37
LRRC28Q86X40 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LRRC28Q86X40 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 MARK2P9-201ENST00000430958 1727 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 AL445209.1-201ENST00000607269 3491 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 ANKRD19P-201ENST00000338192 862 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 CNN2P8-201ENST00000421872 913 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 AC007969.1-201ENST00000433675 447 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 KRT223P-202ENST00000449164 1292 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 AC022616.1-201ENST00000518688 554 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 AC079316.1-201ENST00000548397 411 ntBASIC12.76□□□□□ -0.37
LRRC28Q86X40 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms