Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.21□□□□□ -0.3
H3F3CQ6NXT2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 AC078991.1-201ENST00000437297 610 ntBASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 RN7SL81P-201ENST00000493781 261 ntBASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 MIR4522-201ENST00000584932 87 ntBASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 AC092171.5-201ENST00000608012 942 ntBASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 YRDCP1-201ENST00000621419 643 ntBASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3CQ6NXT2 BEND3P1-201ENST00000421591 1944 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AC011498.7-201ENST00000624986 2027 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AP000356.3-201ENST00000382243 753 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 RN7SL181P-201ENST00000462921 277 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 DNM1P30-201ENST00000563586 452 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AC087045.2-201ENST00000606279 1003 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AC242376.2-201ENST00000619355 883 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 COX6A1P2-201ENST00000620597 330 ntBASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.19□□□□□ -0.3
H3F3CQ6NXT2 AP001184.1-201ENST00000637936 376 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms