Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 AC106794.1-201ENST00000506935 792 ntBASIC12.45□□□□□ -0.42
HIST1H3AP68431 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 MIR3615-201ENST00000581999 87 ntBASIC12.45□□□□□ -0.42
HIST1H3AP68431 AL157813.1-201ENST00000612996 587 ntBASIC12.45□□□□□ -0.42
HIST1H3AP68431 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.45□□□□□ -0.42
HIST1H3AP68431 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HIST1H3AP68431 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GK-202ENST00000378941 458 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 TSPY25P-201ENST00000429463 745 ntBASIC12.44□□□□□ -0.42
HIST1H3AP68431 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AC013355.1-201ENST00000562625 723 ntBASIC12.44□□□□□ -0.42
HIST1H3AP68431 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AC093752.3-201ENST00000567343 901 ntBASIC12.44□□□□□ -0.42
HIST1H3AP68431 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 MIR3188-201ENST00000583494 85 ntBASIC12.44□□□□□ -0.42
HIST1H3AP68431 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 LINC02486-201ENST00000604157 3000 ntBASIC12.44□□□□□ -0.42
HIST1H3AP68431 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.44□□□□□ -0.42
HIST1H3AP68431 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HIST1H3AP68431 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC105206.1-202ENST00000314927 2368 ntBASIC12.43□□□□□ -0.42
HIST1H3AP68431 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms