Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 AL158070.2-201ENST00000623713 1621 ntBASIC12.49□□□□□ -0.41
DEFA3P59666 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA3P59666 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA3P59666 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.49□□□□□ -0.41
DEFA3P59666 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.49□□□□□ -0.41
DEFA3P59666 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA3P59666 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC12.49□□□□□ -0.41
DEFA3P59666 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DEFA3P59666 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 FAM86EP-206ENST00000510506 987 ntBASIC12.48□□□□□ -0.41
DEFA3P59666 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.48□□□□□ -0.41
DEFA3P59666 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 AC103988.2-201ENST00000561804 725 ntBASIC12.48□□□□□ -0.41
DEFA3P59666 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.48□□□□□ -0.41
DEFA3P59666 REXO1L6P-202ENST00000619970 1078 ntBASIC12.48□□□□□ -0.41
DEFA3P59666 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
DEFA3P59666 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA3P59666 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA3P59666 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA3P59666 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms