Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC10.62□□□□□ -0.71
CMC4P56277 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 AC004554.1-201ENST00000422830 1468 ntBASIC10.61□□□□□ -0.71
CMC4P56277 AC061965.1-201ENST00000560524 1465 ntBASIC10.61□□□□□ -0.71
CMC4P56277 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 TEKT4P2-202ENST00000559466 1312 ntBASIC10.61□□□□□ -0.71
CMC4P56277 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 HSPA7-201ENST00000445535 1927 ntBASIC10.61□□□□□ -0.71
CMC4P56277 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CMC4P56277 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CMC4P56277 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 RPSAP15-201ENST00000448168 861 ntBASIC10.61□□□□□ -0.71
CMC4P56277 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.61□□□□□ -0.71
CMC4P56277 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CMC4P56277 RN7SL277P-201ENST00000481521 288 ntBASIC10.61□□□□□ -0.71
CMC4P56277 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 AC245884.6-201ENST00000515672 1067 ntBASIC10.61□□□□□ -0.71
CMC4P56277 AC024681.1-201ENST00000521917 487 ntBASIC10.61□□□□□ -0.71
CMC4P56277 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.61□□□□□ -0.71
CMC4P56277 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CMC4P56277 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 AC011481.3-201ENST00000623895 5594 ntBASIC10.61□□□□□ -0.71
CMC4P56277 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CMC4P56277 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.61□□□□□ -0.71
CMC4P56277 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CMC4P56277 AL596257.1-201ENST00000641463 2694 ntBASIC10.61□□□□□ -0.71
CMC4P56277 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CMC4P56277 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 AL139158.3-201ENST00000641212 1562 ntBASIC10.6□□□□□ -0.71
CMC4P56277 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.6□□□□□ -0.71
CMC4P56277 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CMC4P56277 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.6□□□□□ -0.71
CMC4P56277 LINC01165-201ENST00000445190 1623 ntBASIC10.6□□□□□ -0.71
CMC4P56277 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms