Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.6■□□□□ 0.09
CPT1AP50416 OR2I1P-209ENST00000641730 5365 ntBASIC15.6■□□□□ 0.09
CPT1AP50416 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPT1AP50416 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CPT1AP50416 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 FAM21EP-201ENST00000417804 985 ntBASIC15.6■□□□□ 0.09
CPT1AP50416 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.6■□□□□ 0.09
CPT1AP50416 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.6■□□□□ 0.09
CPT1AP50416 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.6■□□□□ 0.09
CPT1AP50416 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 DDX39AP1-201ENST00000445147 1181 ntBASIC15.6■□□□□ 0.09
CPT1AP50416 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.6■□□□□ 0.09
CPT1AP50416 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.6■□□□□ 0.09
CPT1AP50416 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
CPT1AP50416 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CPT1AP50416 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.6■□□□□ 0.09
CPT1AP50416 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.6■□□□□ 0.09
CPT1AP50416 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.6■□□□□ 0.09
CPT1AP50416 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPT1AP50416 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 AL161772.1-201ENST00000610494 4412 ntBASIC15.6■□□□□ 0.09
CPT1AP50416 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPT1AP50416 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CPT1AP50416 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.59■□□□□ 0.09
CPT1AP50416 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.59■□□□□ 0.09
CPT1AP50416 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.59■□□□□ 0.09
CPT1AP50416 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.59■□□□□ 0.09
CPT1AP50416 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.59■□□□□ 0.09
CPT1AP50416 AP000769.1-203ENST00000637245 208 ntBASIC15.59■□□□□ 0.09
CPT1AP50416 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 HSPA8P5-201ENST00000456928 2069 ntBASIC15.59■□□□□ 0.09
CPT1AP50416 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 INTS4P1-203ENST00000641008 3683 ntBASIC15.59■□□□□ 0.09
CPT1AP50416 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPT1AP50416 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.59■□□□□ 0.09
CPT1AP50416 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.59■□□□□ 0.09
CPT1AP50416 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.59■□□□□ 0.09
CPT1AP50416 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.58■□□□□ 0.09
CPT1AP50416 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPT1AP50416 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
CPT1AP50416 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CPT1AP50416 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPT1AP50416 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.58■□□□□ 0.08
CPT1AP50416 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms