Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 MIR566-201ENST00000385187 94 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 BX679664.3-201ENST00000414070 555 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.86□□□□□ -0.03
MTHFRP42898 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MTHFRP42898 KRT18P46-201ENST00000435568 1279 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 AC113935.1-201ENST00000471722 555 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.86□□□□□ -0.03
MTHFRP42898 VENTXP3-201ENST00000546480 773 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 AC013553.1-201ENST00000560906 267 ntBASIC14.86□□□□□ -0.03
MTHFRP42898 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.86□□□□□ -0.03
MTHFRP42898 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MTHFRP42898 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.86□□□□□ -0.03
MTHFRP42898 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
MTHFRP42898 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MTHFRP42898 AL109809.1-201ENST00000418979 1367 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 AJ011931.1-201ENST00000618749 2492 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
MTHFRP42898 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 HLA-DPA2-205ENST00000433582 733 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 RN7SL375P-201ENST00000492442 298 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.85□□□□□ -0.03
MTHFRP42898 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.85□□□□□ -0.03
MTHFRP42898 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.85□□□□□ -0.03
MTHFRP42898 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 AC068831.5-201ENST00000557387 328 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 DGAT2L7P-201ENST00000602462 744 ntBASIC14.85□□□□□ -0.03
MTHFRP42898 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.85□□□□□ -0.03
MTHFRP42898 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.85□□□□□ -0.03
MTHFRP42898 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MTHFRP42898 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms