Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MGST3-204ENST00000367888 778 ntTSL 3 BASIC15.32■□□□□ 0.04
HTTP42858 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC15.32■□□□□ 0.04
HTTP42858 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC15.32■□□□□ 0.04
HTTP42858 AC067942.1-202ENST00000471756 1057 ntBASIC15.32■□□□□ 0.04
HTTP42858 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HTTP42858 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 AL928654.5-201ENST00000624831 2501 ntBASIC15.32■□□□□ 0.04
HTTP42858 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
HTTP42858 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HTTP42858 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HTTP42858 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC15.32■□□□□ 0.04
HTTP42858 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC15.32■□□□□ 0.04
HTTP42858 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC15.32■□□□□ 0.04
HTTP42858 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HTTP42858 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTTP42858 AC111170.3-201ENST00000624282 2464 ntBASIC15.31■□□□□ 0.04
HTTP42858 AL031587.5-201ENST00000624344 1849 ntBASIC15.31■□□□□ 0.04
HTTP42858 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.31■□□□□ 0.04
HTTP42858 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC15.31■□□□□ 0.04
HTTP42858 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 BICD1P1-201ENST00000457832 1222 ntBASIC15.31■□□□□ 0.04
HTTP42858 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.31■□□□□ 0.04
HTTP42858 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTTP42858 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTTP42858 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.31■□□□□ 0.04
HTTP42858 AP003170.2-201ENST00000544730 786 ntBASIC15.31■□□□□ 0.04
HTTP42858 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC15.31■□□□□ 0.04
HTTP42858 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HTTP42858 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTTP42858 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC15.31■□□□□ 0.04
HTTP42858 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC15.31■□□□□ 0.04
HTTP42858 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC15.31■□□□□ 0.04
HTTP42858 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HTTP42858 BX640514.1-201ENST00000583223 1918 ntBASIC15.31■□□□□ 0.04
HTTP42858 NRADDP-202ENST00000641269 1585 ntBASIC15.31■□□□□ 0.04
HTTP42858 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HTTP42858 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 TUBB8P9-201ENST00000422534 1276 ntBASIC15.3■□□□□ 0.04
HTTP42858 TUBB8P10-201ENST00000430210 1279 ntBASIC15.3■□□□□ 0.04
HTTP42858 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC15.3■□□□□ 0.04
HTTP42858 RN7SL638P-201ENST00000494527 290 ntBASIC15.3■□□□□ 0.04
HTTP42858 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC15.3■□□□□ 0.04
HTTP42858 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 AL157832.2-205ENST00000597245 1649 ntBASIC15.3■□□□□ 0.04
HTTP42858 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 HNRNPA1P3-201ENST00000440968 551 ntBASIC15.3■□□□□ 0.04
HTTP42858 AC116347.1-201ENST00000442824 720 ntBASIC15.3■□□□□ 0.04
HTTP42858 RPL35P1-201ENST00000450819 370 ntBASIC15.3■□□□□ 0.04
HTTP42858 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC15.3■□□□□ 0.04
HTTP42858 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC15.3■□□□□ 0.04
HTTP42858 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC15.3■□□□□ 0.04
HTTP42858 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HTTP42858 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.3■□□□□ 0.04
HTTP42858 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms