Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 AC026748.1-201ENST00000624349 3251 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.73■□□□□ 0.43
COL15A1P39059 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL15A1P39059 AL590824.1-201ENST00000403828 1349 ntBASIC17.73■□□□□ 0.43
COL15A1P39059 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.73■□□□□ 0.43
COL15A1P39059 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.73■□□□□ 0.43
COL15A1P39059 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
COL15A1P39059 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.73■□□□□ 0.43
COL15A1P39059 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL15A1P39059 AC092570.1-201ENST00000414446 469 ntBASIC17.73■□□□□ 0.43
COL15A1P39059 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.73■□□□□ 0.43
COL15A1P39059 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.73■□□□□ 0.43
COL15A1P39059 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 DGAT2L7P-201ENST00000602462 744 ntBASIC17.73■□□□□ 0.43
COL15A1P39059 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
COL15A1P39059 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL15A1P39059 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL15A1P39059 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 OR10N1P-201ENST00000392758 869 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 AL359219.1-201ENST00000556311 934 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.72■□□□□ 0.43
COL15A1P39059 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 AC148477.9-201ENST00000623974 539 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL15A1P39059 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COL15A1P39059 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 SNX18-202ENST00000343017 3140 ntBASIC17.72■□□□□ 0.43
COL15A1P39059 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL15A1P39059 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL15A1P39059 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 AL080243.1-201ENST00000423293 1060 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COL15A1P39059 NRADDP-201ENST00000437305 691 ntBASIC17.71■□□□□ 0.43
COL15A1P39059 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.71■□□□□ 0.43
COL15A1P39059 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms