Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6BP35913 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 AL157823.1-201ENST00000403727 628 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 EEF1DP5-201ENST00000431410 772 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 RPSAP12-201ENST00000435879 888 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6BP35913 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 AC120498.7-201ENST00000562876 330 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.31■□□□□ 0.36
PDE6BP35913 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.31■□□□□ 0.36
PDE6BP35913 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PDE6BP35913 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PDE6BP35913 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PDE6BP35913 SALL4P6-201ENST00000429385 1691 ntBASIC17.31■□□□□ 0.36
PDE6BP35913 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PDE6BP35913 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 AC022532.1-201ENST00000624563 1728 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 AC015909.5-201ENST00000624336 2266 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PDE6BP35913 U3.5-201ENST00000363448 216 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.3■□□□□ 0.36
PDE6BP35913 AC091304.3-201ENST00000566500 716 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.3■□□□□ 0.36
PDE6BP35913 MIR8071-1-201ENST00000616769 65 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 MIR8071-2-201ENST00000616772 65 ntBASIC17.3■□□□□ 0.36
PDE6BP35913 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDE6BP35913 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDE6BP35913 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6BP35913 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 AC136604.1-202ENST00000425471 771 ntBASIC17.29■□□□□ 0.36
PDE6BP35913 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6BP35913 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6BP35913 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6BP35913 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6BP35913 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms