Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005740.1-201ENST00000515639 522 ntBASIC12.27□□□□□ -0.45
CD40P25942 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.27□□□□□ -0.45
CD40P25942 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.27□□□□□ -0.45
CD40P25942 AC087045.2-201ENST00000606279 1003 ntBASIC12.27□□□□□ -0.45
CD40P25942 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 AC018635.2-201ENST00000608625 364 ntBASIC12.27□□□□□ -0.45
CD40P25942 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 AP001184.1-201ENST00000637936 376 ntBASIC12.27□□□□□ -0.45
CD40P25942 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.27□□□□□ -0.45
CD40P25942 SHMT1P1-201ENST00000419974 1312 ntBASIC12.27□□□□□ -0.45
CD40P25942 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.27□□□□□ -0.45
CD40P25942 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.27□□□□□ -0.45
CD40P25942 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 AC020910.6-201ENST00000623084 1459 ntBASIC12.27□□□□□ -0.45
CD40P25942 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.27□□□□□ -0.45
CD40P25942 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 HLA-DMA-203ENST00000395305 777 ntBASIC12.26□□□□□ -0.45
CD40P25942 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 HMGA1P1-201ENST00000415560 1062 ntBASIC12.26□□□□□ -0.45
CD40P25942 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 RPL7P35-201ENST00000446943 740 ntBASIC12.26□□□□□ -0.45
CD40P25942 AC079112.1-201ENST00000454972 939 ntBASIC12.26□□□□□ -0.45
CD40P25942 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 GOLGA2P8-201ENST00000505201 779 ntBASIC12.26□□□□□ -0.45
CD40P25942 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 IQSEC3P1-201ENST00000538799 536 ntBASIC12.26□□□□□ -0.45
CD40P25942 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CD40P25942 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 YRDCP1-201ENST00000621419 643 ntBASIC12.26□□□□□ -0.45
CD40P25942 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 BX640514.1-201ENST00000583223 1918 ntBASIC12.26□□□□□ -0.45
CD40P25942 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.26□□□□□ -0.45
CD40P25942 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms