Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 PFN2-202ENST00000423691 911 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC11.18□□□□□ -0.62
CD28P10747 RN7SL81P-201ENST00000493781 261 ntBASIC11.18□□□□□ -0.62
CD28P10747 MRPL22P1-201ENST00000505398 616 ntBASIC11.18□□□□□ -0.62
CD28P10747 CD164-210ENST00000512821 964 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC11.18□□□□□ -0.62
CD28P10747 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 AC005586.2-201ENST00000563946 837 ntBASIC11.18□□□□□ -0.62
CD28P10747 MIR3180-2-201ENST00000581748 88 ntBASIC11.18□□□□□ -0.62
CD28P10747 AC107464.3-201ENST00000609172 737 ntBASIC11.18□□□□□ -0.62
CD28P10747 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 AC139749.1-202ENST00000617529 3139 ntBASIC11.18□□□□□ -0.62
CD28P10747 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CD28P10747 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
CD28P10747 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CD28P10747 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.17□□□□□ -0.62
CD28P10747 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms