Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 AC008741.2-201ENST00000612792 3115 ntBASIC18.12■□□□□ 0.49
COL5A2P05997 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL5A2P05997 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 AC245140.2-201ENST00000624054 1939 ntBASIC18.11■□□□□ 0.49
COL5A2P05997 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
COL5A2P05997 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COL5A2P05997 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.11■□□□□ 0.49
COL5A2P05997 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC18.11■□□□□ 0.49
COL5A2P05997 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC18.11■□□□□ 0.49
COL5A2P05997 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC18.11■□□□□ 0.49
COL5A2P05997 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC18.11■□□□□ 0.49
COL5A2P05997 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC18.11■□□□□ 0.49
COL5A2P05997 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COL5A2P05997 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.11■□□□□ 0.49
COL5A2P05997 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL5A2P05997 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 AC015802.1-201ENST00000588104 1449 ntBASIC18.11■□□□□ 0.49
COL5A2P05997 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL5A2P05997 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC18.1■□□□□ 0.49
COL5A2P05997 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL5A2P05997 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL5A2P05997 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
COL5A2P05997 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL5A2P05997 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL5A2P05997 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 CASP2-203ENST00000392925 616 ntTSL 3 BASIC18.1■□□□□ 0.49
COL5A2P05997 RPL18AP15-201ENST00000430258 517 ntBASIC18.1■□□□□ 0.49
COL5A2P05997 POLR2LP1-206ENST00000444785 187 ntBASIC18.1■□□□□ 0.49
COL5A2P05997 UGT1A12P-201ENST00000447084 853 ntBASIC18.1■□□□□ 0.49
COL5A2P05997 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC18.1■□□□□ 0.49
COL5A2P05997 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
COL5A2P05997 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 PCTP-206ENST00000573500 919 ntTSL 3 BASIC18.1■□□□□ 0.49
COL5A2P05997 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC18.1■□□□□ 0.49
COL5A2P05997 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 ACTBP9-201ENST00000587663 1099 ntBASIC18.1■□□□□ 0.49
COL5A2P05997 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.1■□□□□ 0.49
COL5A2P05997 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC18.1■□□□□ 0.49
COL5A2P05997 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC18.1■□□□□ 0.49
COL5A2P05997 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COL5A2P05997 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.1■□□□□ 0.49
COL5A2P05997 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.1■□□□□ 0.49
COL5A2P05997 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL5A2P05997 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL5A2P05997 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COL5A2P05997 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC18.09■□□□□ 0.49
COL5A2P05997 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 RN7SL838P-201ENST00000481676 295 ntBASIC18.09■□□□□ 0.49
COL5A2P05997 AC114812.4-201ENST00000506676 757 ntBASIC18.09■□□□□ 0.49
COL5A2P05997 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC18.09■□□□□ 0.49
COL5A2P05997 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 MYL6-215ENST00000549566 685 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms