Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC067931.2-201ENST00000623655 2003 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC072061.1-201ENST00000569710 2234 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AK2P2-201ENST00000439142 405 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 CHCHD2P2-201ENST00000503744 321 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC024681.1-201ENST00000521917 487 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 MIR6769A-201ENST00000617340 73 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 AL139158.3-201ENST00000641212 1562 ntBASIC15.28■□□□□ 0.04
HLA-DRAP01903 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DRAP01903 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRAP01903 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 AC061965.1-201ENST00000560524 1465 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRAP01903 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 PDIA3P2-201ENST00000428073 158 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 AC012618.1-201ENST00000461223 412 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 AC005740.1-201ENST00000515639 522 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 POU5F1P2-201ENST00000521750 823 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 AL161670.2-201ENST00000557650 1227 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 AL109837.1-201ENST00000603272 613 ntBASIC15.27■□□□□ 0.04
HLA-DRAP01903 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-DRAP01903 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 AC130686.1-201ENST00000622936 2466 ntBASIC15.27■□□□□ 0.03
HLA-DRAP01903 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DRAP01903 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms