Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 COX5BP8-201ENST00000416911 349 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC22BO75396 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 CROCCP4-201ENST00000457096 498 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 AC100850.1-201ENST00000506768 649 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 AC023310.1-201ENST00000554836 735 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 KRT18P8-201ENST00000581937 1246 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.8□□□□□ -0.2
SEC22BO75396 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC22BO75396 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC22BO75396 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC22BO75396 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
SEC22BO75396 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SEC22BO75396 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SEC22BO75396 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
SEC22BO75396 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.79□□□□□ -0.2
SEC22BO75396 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 AL356585.2-201ENST00000625078 2396 ntBASIC13.79□□□□□ -0.2
SEC22BO75396 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SEC22BO75396 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.79□□□□□ -0.2
SEC22BO75396 NME2P1-201ENST00000426182 414 ntBASIC13.79□□□□□ -0.2
SEC22BO75396 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.79□□□□□ -0.2
SEC22BO75396 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.79□□□□□ -0.2
SEC22BO75396 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
SEC22BO75396 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.79□□□□□ -0.2
SEC22BO75396 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.79□□□□□ -0.2
SEC22BO75396 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.79□□□□□ -0.2
SEC22BO75396 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.79□□□□□ -0.2
SEC22BO75396 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SEC22BO75396 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22BO75396 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22BO75396 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.78□□□□□ -0.2
SEC22BO75396 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SEC22BO75396 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SEC22BO75396 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.78□□□□□ -0.2
SEC22BO75396 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SEC22BO75396 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SEC22BO75396 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms