Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 SPDYE19P-201ENST00000338590 713 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 ACKR1-201ENST00000368121 1240 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 POM121L8P-201ENST00000417732 1281 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 POM121L9P-203ENST00000441984 1285 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 FTLP10-202ENST00000505798 471 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RFPL4AP1-201ENST00000530883 850 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC005498.2-205ENST00000593218 784 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 MIR8072-201ENST00000614241 80 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC005252.2-201ENST00000624630 1141 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC108024.1-201ENST00000626286 1721 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AC009093.2-202ENST00000620513 2079 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC073862.5-201ENST00000624129 2027 ntBASIC15.27■□□□□ 0.04
CTAGE9A4FU28 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 PMS2P2-201ENST00000425039 1128 ntBASIC15.27■□□□□ 0.04
CTAGE9A4FU28 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 MYCLP2-201ENST00000449268 967 ntBASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC092183.1-201ENST00000469884 875 ntBASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC068587.3-201ENST00000526613 355 ntBASIC15.27■□□□□ 0.04
CTAGE9A4FU28 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTAGE9A4FU28 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 GOLGA2P5-201ENST00000266746 2395 ntBASIC15.27■□□□□ 0.03
CTAGE9A4FU28 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTAGE9A4FU28 AP000593.2-201ENST00000542775 1433 ntBASIC15.26■□□□□ 0.03
CTAGE9A4FU28 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTAGE9A4FU28 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.26■□□□□ 0.03
CTAGE9A4FU28 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTAGE9A4FU28 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTAGE9A4FU28 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTAGE9A4FU28 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms