Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 RPL18AP16-201ENST00000424057 531 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AL136084.1-201ENST00000449172 318 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AP000920.1-201ENST00000531824 344 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ANKRD26P1-203ENST00000569528 966 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 FAM226B-201ENST00000602508 1490 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AL157996.1-201ENST00000624684 2299 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 AL928654.5-201ENST00000624831 2501 ntBASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 RPSAP6-201ENST00000417882 882 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC015818.1-201ENST00000451011 244 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC004466.2-201ENST00000614749 516 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 MIR6125-201ENST00000618986 96 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 MST1P2-201ENST00000457982 2291 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 KRT8P25-201ENST00000473150 1456 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC080013.5-201ENST00000607044 679 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 AC020904.3-201ENST00000624199 442 ntBASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHANK2Q9UPX8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 FAM45BP-202ENST00000592932 1624 ntBASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms