Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AIG1-203ENST00000367596 559 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 ARL4AP4-201ENST00000434170 518 ntBASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AC104212.2-201ENST00000478813 628 ntBASIC18.99■□□□□ 0.63
PHF8Q9UPP1 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AC112250.1-201ENST00000504640 745 ntBASIC18.99■□□□□ 0.63
PHF8Q9UPP1 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 RN7SL524P-201ENST00000581152 300 ntBASIC18.99■□□□□ 0.63
PHF8Q9UPP1 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PHF8Q9UPP1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 LILRP2-202ENST00000413572 1383 ntBASIC18.98■□□□□ 0.63
PHF8Q9UPP1 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AC080013.5-201ENST00000607044 679 ntBASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AL357143.1-203ENST00000639750 881 ntBASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF8Q9UPP1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 OR7E155P-201ENST00000412208 1014 ntBASIC18.97■□□□□ 0.63
PHF8Q9UPP1 PHBP10-201ENST00000416467 784 ntBASIC18.97■□□□□ 0.63
PHF8Q9UPP1 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 AL773545.2-201ENST00000442149 472 ntBASIC18.97■□□□□ 0.63
PHF8Q9UPP1 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 GPX3-202ENST00000517973 612 ntTSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 MEP1AP1-201ENST00000636082 1097 ntBASIC18.97■□□□□ 0.63
PHF8Q9UPP1 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 HSPA8P5-201ENST00000456928 2069 ntBASIC18.97■□□□□ 0.63
PHF8Q9UPP1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF8Q9UPP1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC064850.1-201ENST00000413279 1398 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms