Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AL592076.1-201ENST00000424448 303 ntBASIC14.27□□□□□ -0.13
SPASTQ9UBP0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AC003686.1-201ENST00000550956 1034 ntBASIC14.27□□□□□ -0.13
SPASTQ9UBP0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AC103810.10-201ENST00000606504 343 ntBASIC14.27□□□□□ -0.13
SPASTQ9UBP0 AC051619.9-201ENST00000623237 597 ntBASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPASTQ9UBP0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 LINC01165-201ENST00000445190 1623 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 KRT18P9-201ENST00000604826 1300 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 BEND3P1-201ENST00000421591 1944 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 OR2K2-202ENST00000374428 1038 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 RPL8P2-201ENST00000430538 502 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 FGFR3P1-201ENST00000449999 601 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 PGAM1P5-201ENST00000548011 764 ntBASIC14.26□□□□□ -0.13
SPASTQ9UBP0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.26□□□□□ -0.13
SPASTQ9UBP0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms