Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 LINC02486-201ENST00000604157 3000 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AC092580.1-201ENST00000433998 658 ntBASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AC008267.1-201ENST00000474858 1069 ntBASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 AP002353.1-201ENST00000528257 1599 ntBASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.87□□□□□ -0.19
CUEDC1Q9NWM3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TCAM1P-207ENST00000485295 1537 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC125604.1-201ENST00000496255 707 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC026790.2-201ENST00000606282 430 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AL645939.5-201ENST00000606834 243 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC026740.1-201ENST00000607068 791 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC097724.1-201ENST00000609581 426 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AL591471.1-201ENST00000621855 229 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms