Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 PCDHB17P-202ENST00000623466 3066 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 MKNK2P1-201ENST00000437526 628 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AK2P2-201ENST00000439142 405 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 POLD2P1-201ENST00000511220 997 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 KRT8P23-201ENST00000560090 1207 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AC092865.6-201ENST00000642101 219 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AL109976.1-201ENST00000621919 5678 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AC124319.4-201ENST00000622931 2161 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AC073862.5-201ENST00000624129 2027 ntBASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.11□□□□□ -0.63
KCNIP4Q6PIL6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 MSNP1-201ENST00000511640 1732 ntBASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PCDHA9-201ENST00000378122 6900 ntBASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 MCCD1P2-201ENST00000423228 335 ntBASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms