Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC39BQ5VTQ0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AC011498.7-201ENST00000624986 2027 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 TSPY25P-201ENST00000429463 745 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AP001505.2-201ENST00000616815 443 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AC138627.1-207ENST00000641560 1006 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 AC105206.1-202ENST00000314927 2368 ntBASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC39BQ5VTQ0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC39BQ5VTQ0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms