Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.82□□□□□ -0.04
ERVFC1P60507 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.82□□□□□ -0.04
ERVFC1P60507 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ERVFC1P60507 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ERVFC1P60507 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ERVFC1P60507 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 AC022080.1-201ENST00000366255 781 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 PGAM1P11-201ENST00000416729 680 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 RN7SL351P-201ENST00000469306 248 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.81□□□□□ -0.04
ERVFC1P60507 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 RN7SL121P-201ENST00000584223 273 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 TYMSP2-201ENST00000589501 424 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.81□□□□□ -0.04
ERVFC1P60507 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ERVFC1P60507 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
ERVFC1P60507 FGD5P1-202ENST00000614866 2498 ntBASIC14.81□□□□□ -0.04
ERVFC1P60507 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ERVFC1P60507 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC106827.1-201ENST00000366454 431 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms