Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PER3P56645 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.35□□□□□ -0.27
PER3P56645 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 AC023024.2-201ENST00000623561 1993 ntBASIC13.34□□□□□ -0.27
PER3P56645 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
PER3P56645 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.34□□□□□ -0.27
PER3P56645 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.34□□□□□ -0.27
PER3P56645 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 RCC2P8-201ENST00000502779 1035 ntBASIC13.34□□□□□ -0.27
PER3P56645 AP003171.2-201ENST00000528208 925 ntBASIC13.34□□□□□ -0.27
PER3P56645 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 NPM1P43-201ENST00000558669 786 ntBASIC13.34□□□□□ -0.27
PER3P56645 AC242376.1-201ENST00000559033 726 ntBASIC13.34□□□□□ -0.27
PER3P56645 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 AC103810.10-201ENST00000606504 343 ntBASIC13.34□□□□□ -0.27
PER3P56645 AC002472.3-201ENST00000640124 621 ntBASIC13.34□□□□□ -0.27
PER3P56645 AL805961.1-201ENST00000642026 753 ntBASIC13.34□□□□□ -0.27
PER3P56645 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
PER3P56645 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.34□□□□□ -0.27
PER3P56645 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PER3P56645 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.34□□□□□ -0.27
PER3P56645 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PER3P56645 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.33□□□□□ -0.27
PER3P56645 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.33□□□□□ -0.27
PER3P56645 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.33□□□□□ -0.27
PER3P56645 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.33□□□□□ -0.27
PER3P56645 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
PER3P56645 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 ZBED1P1-201ENST00000502364 1930 ntBASIC13.33□□□□□ -0.28
PER3P56645 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 AP000593.2-201ENST00000542775 1433 ntBASIC13.33□□□□□ -0.28
PER3P56645 TBC1D3J-201ENST00000620719 1426 ntBASIC13.33□□□□□ -0.28
PER3P56645 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 PDIA3P2-201ENST00000428073 158 ntBASIC13.33□□□□□ -0.28
PER3P56645 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.33□□□□□ -0.28
PER3P56645 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms