Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL596276.2-201ENST00000447525 331 ntBASIC10.63□□□□□ -0.71
CMC4P56277 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 AC113935.1-201ENST00000471722 555 ntBASIC10.63□□□□□ -0.71
CMC4P56277 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.63□□□□□ -0.71
CMC4P56277 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 ZNF767P-206ENST00000513792 565 ntBASIC10.63□□□□□ -0.71
CMC4P56277 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 CR392039.2-201ENST00000623182 509 ntBASIC10.63□□□□□ -0.71
CMC4P56277 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.63□□□□□ -0.71
CMC4P56277 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 AL022313.4-201ENST00000562756 2046 ntBASIC10.63□□□□□ -0.71
CMC4P56277 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.63□□□□□ -0.71
CMC4P56277 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CMC4P56277 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.63□□□□□ -0.71
CMC4P56277 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 AC005089.1-201ENST00000619486 2241 ntBASIC10.62□□□□□ -0.71
CMC4P56277 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CMC4P56277 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 AC005912.2-201ENST00000619492 2400 ntBASIC10.62□□□□□ -0.71
CMC4P56277 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 LINC01815-202ENST00000641468 1409 ntBASIC10.62□□□□□ -0.71
CMC4P56277 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 SLC25A24P2-201ENST00000415059 510 ntBASIC10.62□□□□□ -0.71
CMC4P56277 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 SPTLC1P5-201ENST00000450718 252 ntBASIC10.62□□□□□ -0.71
CMC4P56277 AC012618.1-201ENST00000461223 412 ntBASIC10.62□□□□□ -0.71
CMC4P56277 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.62□□□□□ -0.71
CMC4P56277 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 MAX-218ENST00000557746 571 ntTSL 4 BASIC10.62□□□□□ -0.71
CMC4P56277 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.62□□□□□ -0.71
CMC4P56277 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 AP001505.2-201ENST00000616815 443 ntBASIC10.62□□□□□ -0.71
CMC4P56277 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 AL139099.5-201ENST00000635274 300 ntBASIC10.62□□□□□ -0.71
CMC4P56277 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CMC4P56277 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CMC4P56277 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CMC4P56277 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms