Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.07□□□□□ -0.48
COL8A2P25067 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
COL8A2P25067 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COL8A2P25067 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.07□□□□□ -0.48
COL8A2P25067 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 AC089987.1-201ENST00000551654 2209 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 AC073869.2-201ENST00000417338 1026 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 OR8T1P-201ENST00000421347 918 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 RPS2P36-201ENST00000456516 831 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 SPCS2P2-201ENST00000603270 608 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 AC009560.1-201ENST00000620208 434 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
COL8A2P25067 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.06□□□□□ -0.48
COL8A2P25067 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
COL8A2P25067 AC007326.2-201ENST00000624224 7579 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.06□□□□□ -0.48
COL8A2P25067 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COL8A2P25067 MARK2P16-201ENST00000605714 1723 ntBASIC12.06□□□□□ -0.48
COL8A2P25067 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
COL8A2P25067 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms