Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 AC012617.1-204ENST00000586340 2305 ntBASIC16.78■□□□□ 0.28
TOP1P11387 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.77■□□□□ 0.28
TOP1P11387 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.77■□□□□ 0.28
TOP1P11387 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.77■□□□□ 0.28
TOP1P11387 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.77■□□□□ 0.28
TOP1P11387 RPSAP15-201ENST00000448168 861 ntBASIC16.77■□□□□ 0.28
TOP1P11387 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 RN7SL67P-201ENST00000492147 296 ntBASIC16.77■□□□□ 0.28
TOP1P11387 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.77■□□□□ 0.28
TOP1P11387 KRT8P1-201ENST00000557533 1207 ntBASIC16.77■□□□□ 0.28
TOP1P11387 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.77■□□□□ 0.28
TOP1P11387 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TOP1P11387 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.77■□□□□ 0.27
TOP1P11387 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.77■□□□□ 0.27
TOP1P11387 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TOP1P11387 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 AL359881.3-201ENST00000602640 1721 ntBASIC16.76■□□□□ 0.27
TOP1P11387 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 KRT18P9-201ENST00000604826 1300 ntBASIC16.76■□□□□ 0.27
TOP1P11387 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 BRD7P5-201ENST00000299197 1822 ntBASIC16.76■□□□□ 0.27
TOP1P11387 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP1P11387 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.76■□□□□ 0.27
TOP1P11387 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.76■□□□□ 0.27
TOP1P11387 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.76■□□□□ 0.27
TOP1P11387 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.76■□□□□ 0.27
TOP1P11387 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP1P11387 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.76■□□□□ 0.27
TOP1P11387 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.76■□□□□ 0.27
TOP1P11387 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.76■□□□□ 0.27
TOP1P11387 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP1P11387 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.76■□□□□ 0.27
TOP1P11387 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 HSPA8P5-201ENST00000456928 2069 ntBASIC16.76■□□□□ 0.27
TOP1P11387 AC087386.2-201ENST00000623212 4637 ntBASIC16.76■□□□□ 0.27
TOP1P11387 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TOP1P11387 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TOP1P11387 AC079781.5-202ENST00000641784 3743 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms