Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOEP02649 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOEP02649 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
APOEP02649 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
APOEP02649 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOEP02649 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOEP02649 AC005077.2-201ENST00000449786 690 ntBASIC15□□□□□ -0.01
APOEP02649 RN7SL11P-201ENST00000471305 293 ntBASIC15□□□□□ -0.01
APOEP02649 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 ACTG1P17-201ENST00000558391 1119 ntBASIC15□□□□□ -0.01
APOEP02649 AC140658.4-201ENST00000561990 352 ntBASIC15□□□□□ -0.01
APOEP02649 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15□□□□□ -0.01
APOEP02649 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15□□□□□ -0.01
APOEP02649 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15□□□□□ -0.01
APOEP02649 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOEP02649 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOEP02649 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15□□□□□ -0.01
APOEP02649 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15□□□□□ -0.01
APOEP02649 TCAM1P-207ENST00000485295 1537 ntBASIC15□□□□□ -0.01
APOEP02649 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOEP02649 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
APOEP02649 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOEP02649 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15□□□□□ -0.01
APOEP02649 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15□□□□□ -0.01
APOEP02649 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOEP02649 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
APOEP02649 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOEP02649 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOEP02649 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
APOEP02649 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.99□□□□□ -0.01
APOEP02649 TSPY25P-201ENST00000429463 745 ntBASIC14.99□□□□□ -0.01
APOEP02649 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 SPTLC1P5-201ENST00000450718 252 ntBASIC14.99□□□□□ -0.01
APOEP02649 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.99□□□□□ -0.01
APOEP02649 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.99□□□□□ -0.01
APOEP02649 AC090386.2-201ENST00000623010 1039 ntBASIC14.99□□□□□ -0.01
APOEP02649 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.99□□□□□ -0.01
APOEP02649 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 AL139099.5-201ENST00000635274 300 ntBASIC14.99□□□□□ -0.01
APOEP02649 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 CICP16-201ENST00000502609 2813 ntBASIC14.99□□□□□ -0.01
APOEP02649 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.99□□□□□ -0.01
APOEP02649 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.99□□□□□ -0.01
APOEP02649 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.99□□□□□ -0.01
APOEP02649 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOEP02649 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms