Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 GOLGA2P8-201ENST00000505201 779 ntBASIC15.31■□□□□ 0.04
HLA-DRAP01903 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 RPL13AP3-202ENST00000494676 1473 ntBASIC15.31■□□□□ 0.04
HLA-DRAP01903 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HLA-DRAP01903 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-DRAP01903 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.3■□□□□ 0.04
HLA-DRAP01903 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 AC073150.1-201ENST00000450406 1084 ntBASIC15.3■□□□□ 0.04
HLA-DRAP01903 RCC2P1-201ENST00000452257 1476 ntBASIC15.3■□□□□ 0.04
HLA-DRAP01903 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 KRT8P1-201ENST00000557533 1207 ntBASIC15.3■□□□□ 0.04
HLA-DRAP01903 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DRAP01903 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DRAP01903 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC068760.1-201ENST00000493579 1953 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 KRT17P5-201ENST00000332088 839 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC116345.2-201ENST00000512837 523 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 ALG1L13P-202ENST00000519320 584 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 AC103810.3-201ENST00000583567 96 ntBASIC15.29■□□□□ 0.04
HLA-DRAP01903 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DRAP01903 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DRAP01903 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms