Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AL512310.5-201ENST00000551999 515 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 AC103810.3-201ENST00000583567 96 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AL022334.2-201ENST00000610000 484 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 MEG3_2.1-201ENST00000611456 105 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 AC100757.4-201ENST00000626934 759 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 BRD7P5-201ENST00000299197 1822 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AGAP10P-201ENST00000454844 2418 ntBASIC11.04□□□□□ -0.64
TRBV12-3P01733 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRBV12-3P01733 AC008132.1-202ENST00000342005 1389 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AC239868.1-201ENST00000369385 493 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 RPS9P1-201ENST00000419943 583 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 AL928654.5-201ENST00000624831 2501 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 KRT8P24-201ENST00000560290 1559 ntBASIC11.03□□□□□ -0.64
TRBV12-3P01733 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRBV12-3P01733 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRBV12-3P01733 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRBV12-3P01733 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRBV12-3P01733 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
TRBV12-3P01733 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
TRBV12-3P01733 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TRBV12-3P01733 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms