Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 RNA5SP359-201ENST00000364838 113 ntBASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 AC103691.2-201ENST00000618824 433 ntBASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 FP325330.2-201ENST00000624219 5630 ntBASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPA2E9PIF3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC090505.1-201ENST00000430515 1834 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC026748.1-201ENST00000624349 3251 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AL583805.1-201ENST00000391389 531 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC026316.1-201ENST00000398900 414 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AL592076.1-201ENST00000424448 303 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 OR2R1P-201ENST00000441404 914 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NOC2LP1-201ENST00000450578 752 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC003686.1-201ENST00000550956 1034 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 AC005586.2-201ENST00000563946 837 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 U62317.3-201ENST00000608319 855 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 KRT18P9-201ENST00000604826 1300 ntBASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms