Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 RPS9P1-201ENST00000419943 583 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC091804.1-201ENST00000486888 567 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC044849.1-201ENST00000519737 1188 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AL161773.1-201ENST00000624845 863 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 NAP1L6-202ENST00000641404 1222 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC004554.1-201ENST00000422830 1468 ntBASIC12.57□□□□□ -0.4
NPIPB4C9JG80 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NPIPB4C9JG80 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TCAF1P1-201ENST00000414990 2232 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC239868.1-201ENST00000369385 493 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 NKAIN1P1-201ENST00000435754 582 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC104306.2-201ENST00000451877 341 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC138649.2-201ENST00000615886 705 ntBASIC12.56□□□□□ -0.4
NPIPB4C9JG80 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.56□□□□□ -0.4
NPIPB4C9JG80 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms