Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 AL645937.6-201ENST00000641122 3727 ntBASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGB1P1B2RPK0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC023141.5-201ENST00000458585 616 ntBASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AL844908.2-201ENST00000609461 460 ntBASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC020917.4-201ENST00000623994 1999 ntBASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AOC4P-203ENST00000566825 2289 ntBASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC018445.4-201ENST00000624066 2291 ntBASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HMGB1P1B2RPK0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SHC1P1-201ENST00000425230 1745 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SNORA50C-201ENST00000408535 133 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AL590627.1-203ENST00000421194 1026 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 GNAQP1-201ENST00000444815 1067 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 RARRES2P5-201ENST00000564013 466 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AC073592.8-201ENST00000624126 511 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SNORA50.1-201ENST00000628590 135 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 DDX12P-201ENST00000432996 2947 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 RCC2P1-201ENST00000452257 1476 ntBASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
HMGB1P1B2RPK0 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms