Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 RN7SL556P-201ENST00000582856 298 ntBASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 AC009084.3-201ENST00000623356 437 ntBASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.19■□□□□ 0.18
SYNPO2Q9UMS6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CICP16-201ENST00000502609 2813 ntBASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 PSAT1P2-201ENST00000426107 972 ntBASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC007191.1-201ENST00000623179 2995 ntBASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 AC092115.1-201ENST00000566277 1402 ntBASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.18■□□□□ 0.18
SYNPO2Q9UMS6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AC106827.1-201ENST00000366454 431 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AL355334.1-201ENST00000417713 215 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AL135901.1-201ENST00000451812 333 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 MIR5196-201ENST00000578146 115 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AL451007.2-201ENST00000632004 563 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 HLA-C-210ENST00000640219 976 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 AC005089.1-201ENST00000619486 2241 ntBASIC16.17■□□□□ 0.18
SYNPO2Q9UMS6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms