Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 KRT8P29-201ENST00000420409 1371 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 MTX1P1-201ENST00000440904 838 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 TUBB8P8-201ENST00000458717 1058 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 RN7SL455P-201ENST00000580629 282 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AL359881.2-201ENST00000602973 570 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AC067931.2-201ENST00000623655 2003 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AP000437.1-201ENST00000624057 2085 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AC115284.2-201ENST00000624646 2054 ntBASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RSPO3Q9BXY4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AC020917.4-201ENST00000623994 1999 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AC093462.1-201ENST00000621167 1683 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 MSNP1-201ENST00000511640 1732 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 Z98885.3-201ENST00000624882 1757 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 DPM3-202ENST00000368399 517 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 YBX1P6-201ENST00000442962 1002 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AL591846.1-201ENST00000451736 433 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AC116345.2-201ENST00000512837 523 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms