Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC105339.1-204ENST00000636249 355 ntBASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC002350.2-201ENST00000623894 1828 ntBASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 DRD5P1-201ENST00000456605 1438 ntBASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SEC22CQ9BRL7 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 CICP7-201ENST00000432723 2477 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 MRPL3P1-201ENST00000400109 1033 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AL139094.1-201ENST00000405549 1188 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 KRT18P32-201ENST00000424695 1287 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 FAM58DP-201ENST00000428076 619 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC005237.2-201ENST00000434368 219 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC022616.1-201ENST00000518688 554 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AL512361.1-201ENST00000554200 418 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AC040169.1-201ENST00000565382 521 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 AL583810.2-201ENST00000556430 3254 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms