Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 GPAA1P2-201ENST00000417923 928 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 AL596276.2-201ENST00000447525 331 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 AKR7A2P1-201ENST00000460134 915 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AC090857.1-201ENST00000527400 390 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 MARK2P9-201ENST00000430958 1727 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.53□□□□□ -0.4
TMEM54Q969K7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM54Q969K7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM54Q969K7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
TMEM54Q969K7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.52□□□□□ -0.4
TMEM54Q969K7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TMEM54Q969K7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.52□□□□□ -0.4
TMEM54Q969K7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TMEM54Q969K7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM54Q969K7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 AC006987.1-201ENST00000413610 527 ntBASIC12.52□□□□□ -0.41
TMEM54Q969K7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 FNTAP2-201ENST00000430308 634 ntBASIC12.52□□□□□ -0.41
TMEM54Q969K7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 RN7SL455P-201ENST00000580629 282 ntBASIC12.52□□□□□ -0.41
TMEM54Q969K7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 FAM90A12P-201ENST00000519497 2375 ntBASIC12.52□□□□□ -0.41
TMEM54Q969K7 FAM90A24P-201ENST00000520792 2369 ntBASIC12.52□□□□□ -0.41
TMEM54Q969K7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM54Q969K7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TMEM54Q969K7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms